Insertion junction: CLIP2.044559_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.044559
Chromosome:chromosome 7
Location:2957230
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g332901 (1 of 80) IPR003882 - Pistil-specific extensin-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCGCGGGCACAGCTGAGACTGAATGCAGCGCGGACAGCGGGCCATTG
Internal bar code:GAGATTAAGGACTTACTATACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2569
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGCAGGTGACAGGGATCG
Suggested primer 2:ACAGCATACGTGAGCACACA