Insertion junction: CLIP2.044561_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.044561
Chromosome:chromosome 7
Location:2196645
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327150 (1 of 2) IPR001810//IPR003347 - F-box domain // JmjC domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCGGCTGGGCTCATGCCAGCGCCCGCCGCCGCCGCCGGCCCGCCCGCC
Internal bar code:GGCTGGCTCCGTCTCATCAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:247
LEAP-Seq percent confirming:7.14286
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AGTACAAACACAGCGAGGCA
Suggested primer 2:AGGGGTGAGGGATACTGGTC