Insertion junction: CLIP2.044563_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.044563
Chromosome:chromosome 1
Location:3902677
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g025700 (1 of 8) PF00211//PF01547 - Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc) // Bacterial extracellular solute-binding protein (SBP_bac_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTGCTGCCTGCTGTAACTGCCGCCGTGTGTGCGCAGGCTCTGCTGCAA
Internal bar code:GCGACGGCACTAGTGTAATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:889
LEAP-Seq percent confirming:4.54545
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCGACTGCCAGAGTTGTGTA
Suggested primer 2:GCGTAGTTTGTCGACATGCC