Insertion junction: CLIP2.044568_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.044568
Chromosome:chromosome 9
Location:3158098
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394362 (1 of 2) IPR000104//IPR001005//IPR009057 - Antifreeze protein, type I // SANT/Myb domain // Homeodomain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCGATAACTAACCACATAAGAAGGGAGCTCACCTGCAGCCAACCCGGT
Internal bar code:CGTCACAGTAGCGTTGACATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:924
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAGCCCTTTTTGCGACA
Suggested primer 2:GTCTCAGAGACTGGGTGCAC