Insertion junction: CLIP2.044577_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.044577
Chromosome:chromosome 5
Location:210019
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00047317

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGGCCCAGCTCACGACAAGCAGTCATAGCTGCTCCTTCCCTCCTATAC
Internal bar code:CTTTCTCACTTTTGAGGTAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2970
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCTACAGTTCCACACCGG
Suggested primer 2:CTGTCCTTCCTCTGCCCTTG