Insertion junction: CLIP2.044582_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.044582
Chromosome:chromosome 1
Location:8031474
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g058886 (1 of 1) K06944 - uncharacterized protein (K06944) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGGACTGGAGGTAGGACTGGAGGTAGGGGAGGAGGTAGGGCAGGTGG
Internal bar code:AAACCTCTGGACGAGCGGAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1089
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CATACCCGGTGTCTCATCCG
Suggested primer 2:TACGAGTTCACCACGCTCAC