Insertion junction: CLIP2.044590_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044590
Chromosome:chromosome 17
Location:3461998
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g723700 (1 of 2) PTHR32246:SF18 - C2 DOMAIN-CONTAINING PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTACTGGTGTCCGCACTACACAAACAGCTCGCGCCCTTGTCACTCCTGA
Internal bar code:TTTTGCACCAGAAACATTTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:5602
LEAP-Seq percent confirming:81.6667
LEAP-Seq n confirming:98
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:120

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGACAGCTCGCAGTTCT
Suggested primer 2:AGAGCTACCCAGGCACCATA