Insertion junction: CLIP2.044591_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.044591
Chromosome:chromosome 2
Location:3196107
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800211 (1 of 3) IPR000104//IPR020846 - Antifreeze protein, type I // Major facilitator superfamily domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGTAGTCATGTGGGGAAGGGAGTGATGCAGTCACAGAGTATGAAGGG
Internal bar code:AATAAATTATTCGGCTAAATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:79
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCCCCCTCTCCTCCTTCC
Suggested primer 2:CCCTCACGCACACACCTAAT