Insertion junction: CLIP2.044599_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044599
Chromosome:chromosome 13
Location:2521539
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580050 (1 of 2) PTHR23074//PTHR23074:SF20 - AAA ATPASE // GH08677P intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTGATTTGGCTCTGAGAGCCGCACCTCCGTCTATATTGTGAGACGTCG
Internal bar code:CAGCAAATTGCTCGAAGGTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1454
LEAP-Seq percent confirming:27.907
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCGATGGGCATGTATGA
Suggested primer 2:GTGATGAACCCCGACCACAT