Insertion junction: CLIP2.044609_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044609
Chromosome:chromosome 10
Location:3082320
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g441300 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGCGGGGGTGCCTTGTTGGCCGACAGCAAACCGCCTGGCAGAGGCGG
Internal bar code:TGGCTTTGCGGTGGATGCGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2852
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:121
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:121

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTACCGCATGTCTTGGT
Suggested primer 2:AACTCAGTGGTCAGCTCTGC