Insertion junction: CLIP2.044610_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044610
Chromosome:chromosome 9
Location:3236396
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394769 (1 of 14) PF03133 - Tubulin-tyrosine ligase family (TTL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGCGTACCGCGCATTCCTGTCAGCTGTCAGCTGCGCACGTGCCGACG
Internal bar code:GCTTTTATGTGATTGCTATGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:801
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AGTAGATTTGACGGCGTGCA
Suggested primer 2:AAAATGTAGCCGCCGAGGAA