Insertion junction: CLIP2.044613_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.044613
Chromosome:chromosome 1
Location:5100893
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035600 MSC2 Mechanosensitive ion channel; (1 of 3) PTHR30566 - YNAI-RELATED MECHANOSENSITIVE ION CHANNEL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGATCCTGCATCGAATCCATGCATCTCCACCCATCCGCTGCACAGGT
Internal bar code:GCACAGATGGGAGTTCGTGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1491
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCACACACACACACATT
Suggested primer 2:CTGCCGCCGTACTTCAGTAT