Insertion junction: CLIP2.044616_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.044616
Chromosome:chromosome 2
Location:3169564
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g096601 (1 of 1) IPR001440//IPR013026//IPR019734 - Tetratricopeptide repeat 1 // Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCGGGAGGGCAAGCACACATTCAAGAAGATGAAGGCCGGAGGCGGCGG
Internal bar code:TTGCTACACACCTAACGCACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2206
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCTCCTCCTCTCCTGCT
Suggested primer 2:ATGAAGTGAAGTGCCGACGT