Insertion junction: CLIP2.044625_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044625
Chromosome:chromosome 6
Location:3426760
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278098 MCCA,MCC1 Methylcrotonoyl-CoA carboxylase alpha subunit; (1 of 2) 6.4.1.4 - Methylcrotonoyl-CoA carboxylase / Methylcrotonyl-CoA carboxylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGAAGCAAACTTGGCAGGGTGGAGAGGGGTGTTTCGAAATATTGGGTG
Internal bar code:ACCGATCCTTCTAATTACGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:179
LEAP-Seq percent confirming:41.1765
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGAGCCGAGCCAAAGAGA
Suggested primer 2:CGTGATGCTGACAGAGGGTT