Insertion junction: CLIP2.044634_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044634
Chromosome:chromosome 3
Location:6430081
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193000 HAD5 Halo-acid dehalogenase-like hydrolase; (1 of 1) 3.1.3.29 - N-acylneuraminate-9-phosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTGAGGGCAGACAGGAAACCGGTTACAGACGTCGTTGTCTTGGCCGT
Internal bar code:CTCATGGCGTCTCTTGGAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4488
LEAP-Seq percent confirming:93.5897
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTGATCATGCATGGCTG
Suggested primer 2:TGGCGTGAGAAACCGAATCA