Insertion junction: CLIP2.044636_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044636
Chromosome:chromosome 7
Location:433494
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g315200 NRM3,NRAMP3,RET1 Related to Ethylene Insensitive Protein 2 (EIN2); (1 of 1) PTHR11706//PTHR11706:SF45 - MANGANESE TRANSPORTER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGCGTAAAAGTTGAGGTTGAAACGAGGTTGGGACACGTGTCGCCGAA
Internal bar code:CGGTCGTGGGGATGGATTAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:458
LEAP-Seq percent confirming:43.3962
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:AGACCCTGTCCTCCTCCATC
Suggested primer 2:TGCATGTGACCGGCTTGTAT