Insertion junction: CLIP2.044639_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044639
Chromosome:chromosome 12
Location:8483950
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549600 (1 of 96) IPR019734 - Tetratricopeptide repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATTCGCAGGTGAAGCTGCGGCCTCTCAACCCCACGGCCTGGAACTGCC
Internal bar code:AGCCAACGCCAAGTAAGAAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2183
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CTGACACACACGCACACAAG
Suggested primer 2:AGGACTCTTGCACCATCAGC