Insertion junction: CLIP2.044641_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.044641
Chromosome:chromosome 10
Location:3893049
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446400 VPS4,KATL1,KAT3,KAT2 (1 of 1) PTHR23074//PTHR23074:SF78 - AAA ATPASE // KATANIN P60 ATPASE-CONTAINING SUBUNIT A-LIKE 2; Katanin like protein 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCACAGGTCCGTCCAACTCCAGTTTCGACATGAGGCGCCGCAGCGGCC
Internal bar code:TTGTACGGATCTTCGAAGGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1442
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AACCTTGCCACCACTTGTCA
Suggested primer 2:TGCCCTTCGTCTTGTGTACC