Insertion junction: CLIP2.044657_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.044657
Chromosome:chromosome 6
Location:1102354
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g257600 FA1 (1 of 4) PF13516 - Leucine Rich repeat (LRR_6); Flagellar Autonomy Protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAACGTATATACATACTAGTGTTGAAAATATAATTCAGCTCACTGAT
Internal bar code:TGGACTATCAACTGGCTTGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3061
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCCTCCAGGTCCAACAC
Suggested primer 2:GTAGCAAGATGTGGTGGGCT