Insertion junction: CLIP2.044657_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044657
Chromosome:chromosome 6
Location:1102360
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g257600 FA1 (1 of 4) PF13516 - Leucine Rich repeat (LRR_6); Flagellar Autonomy Protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAATCACACAGGAGTTGCGCAACTCAGGCACTGTGAATTACACACGG
Internal bar code:TGGACTATCAACTGGCTTGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:109
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGCAAGATGTGGTGGGCT
Suggested primer 2:CATCCCTCCAGGTCCAACAC