Insertion junction: CLIP2.044667_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.044667
Chromosome:chromosome 3
Location:5089657
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180300 SIR3 (1 of 1) 1.8.1.2 - Assimilatory sulfite reductase (NADPH) / Sulfite reductase (NADPH); Sulfite reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCTTGCGTGCTGTCTCTCGACTCGCCAAAAGTACGGGATGAGTCCTA
Internal bar code:TCTACAACCTCCTTGAATGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4956
LEAP-Seq percent confirming:58.1818
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGAGTTGCGGAGTTACGG
Suggested primer 2:ATAGCTTCCTGGTCGGCAAC