Insertion junction: CLIP2.044671_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044671
Chromosome:chromosome 10
Location:4832939
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453300 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCTGGCAGGCCATATAAAGGAGGTACGATACGATGACAAACCAATGCA
Internal bar code:ATGTTGGCCTACGTGCTTTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1995
LEAP-Seq percent confirming:98.2143
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGCTCCTTTGCGTACATC
Suggested primer 2:CGATCTTTGCATCGGCCTTG