Insertion junction: CLIP2.044671_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.044671
Chromosome:chromosome 10
Location:4832944
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453300 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGTTGATATGAATGCGCCTTACCAAACTTGGCTGAGCTGTATCTTCA
Internal bar code:TACTGACGAGCACTTAGCCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3218
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CGATCTTTGCATCGGCCTTG
Suggested primer 2:AGGGCTCCTTTGCGTACATC