Insertion junction: CLIP2.044692_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.044692
Chromosome:chromosome 3
Location:4991260
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179550 TF2H2 (1 of 1) K03142 - transcription initiation factor TFIIH subunit 2 (TFIIH2, GTF2H2, SSL1); Transcription factor TFIIH, 44 kDa subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTTCTAAACCTCTTCAGCTCTCACCGCCCCTCGGCGCCGTCCTCCCCT
Internal bar code:CCCGCGACATAGGGTTTTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1932
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ATAAACTCCCTCCCTCCCCC
Suggested primer 2:AGAGACGACCTCGGGATTGA