Insertion junction: CLIP2.044696_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.044696
Chromosome:chromosome 13
Location:612933
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g565700 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTCGCGGTCACTCGCAAAAGCGCAAGCAGGTGGACCTTCTAAATGAGC
Internal bar code:GCCCTGGTATTGCTAAATGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:656
LEAP-Seq percent confirming:41.3793
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ACTATTGCCCTCCCGCTCTA
Suggested primer 2:CAAGTTGGGCCCTGATAGCA