Insertion junction: CLIP2.044697_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.044697
Chromosome:chromosome 12
Location:1624915
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g486900 (1 of 1) 1.3.1.88 - tRNA-dihydrouridine(16/17) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGTATGCATGGATGGGTGGGTGGGTGGGTGGGTGCGTGGGTGCTTGCC
Internal bar code:ACGGAGTTATGGTTACGTGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:272
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCAACCCAACAAGCTGCC
Suggested primer 2:GAGAGGGAGTGGTTGAAGGC