Insertion junction: CLIP2.044698_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.044698
Chromosome:chromosome 3
Location:7534775
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205300 EXN7 (1 of 1) IPR000104//IPR002562//IPR012337 - Antifreeze protein, type I // 3'-5' exonuclease domain // Ribonuclease H-like domain; 3'-5' exonuclease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGACCGGGAGCAGCACCGGCAACCGCGCCACCAGCGCGACGGCTGCTC
Internal bar code:GGGGGCTAGGGAAGTTCAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:896
LEAP-Seq percent confirming:54.1667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCGCTGACATTCATGCTG
Suggested primer 2:GCAGCAGTAGCAGTAGCAGT