Insertion junction: CLIP2.044699_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.044699
Chromosome:chromosome 12
Location:1625012
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g486900 (1 of 1) 1.3.1.88 - tRNA-dihydrouridine(16/17) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAGGGCTGGGGTAAAGGCGATATGCCGCAGGGGATATGCCAAGCGCAT
Internal bar code:TGGAACAGTGGCTTACCAGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:797
LEAP-Seq percent confirming:53.3333
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCAACCCAACAAGCTGCC
Suggested primer 2:GAGAGGGAGTGGTTGAAGGC