Insertion junction: CLIP2.044701_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.044701
Chromosome:chromosome 12
Location:8080491
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g552700 (1 of 2) IPR001190//IPR006626//IPR011050//IPR017448 - SRCR domain // Parallel beta-helix repeat // Pectin lyase fold/virulence factor // SRCR-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCTGTTGATGTCATGCAGCGGTGCAAACAATACGGCACACGCAGGGGC
Internal bar code:CTTGAACTTATCTAAATAGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:913
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTGCATGTGTGTGTGAC
Suggested primer 2:GATGGTGAGGCACAAGACCA