Insertion junction: CLIP2.044702_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044702
Chromosome:chromosome 17
Location:1906122
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g709850 ACK2 (1 of 2) 2.7.2.1 - Acetate kinase / AK; Acetate kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGGCCGACGCCTTGCCATCACACCTCCACCTGTTGCTGACACAGCGGA
Internal bar code:ATATCTTTAGATGGTTAGCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1267
LEAP-Seq percent confirming:92.5
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:AGGACAAATGGGAGAGCAGC
Suggested primer 2:GCGAACTTCTAATGGCGCAG