Insertion junction: CLIP2.044712_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044712
Chromosome:chromosome 10
Location:4748693
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g452550 HOPP1,HOP1 Homologous-pairing protein 1; (1 of 3) PF02301 - HORMA domain (HORMA) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGATGCTGCTCCTCCTGCTCCTGCAGGGCCTGCATGGCTTCGCCGTC
Internal bar code:TCTGGGGACAAGAGGCGTGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1019
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CATTCATGCGCCTTACGTGG
Suggested primer 2:TTCTCATCCAGCCTACCCGA