Insertion junction: CLIP2.044720_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.044720
Chromosome:chromosome 13
Location:2068160
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576950 (1 of 2) PTHR13690//PTHR13690:SF71 - FAMILY NOT NAMED // PROTEIN C37C3.9 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCCACAACCCCGTCGCCAGGGACGCCGCCCAGCCCACCCCGTCCACC
Internal bar code:AGACTTTAAAAATCCAGAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:89
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCGTGCCAGTAGTTGAT
Suggested primer 2:CTCATGCAGGTCGTTCTGGT