Insertion junction: CLIP2.044721_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.044721
Chromosome:chromosome 2
Location:2269636
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g090150 CAF2,PANC,PAN3,PANC1 (1 of 1) 6.3.2.1 - Pantoate--beta-alanine ligase (AMP-forming) / Pantothenate synthetase; Pantothenate synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCGACGGGGGGGTTGCATTCATGATTAATTAAGAAGTGAAGTCGTAG
Internal bar code:GGCGACATGTGGAATGGATAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1892
LEAP-Seq percent confirming:47.2222
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGATGACCGTGCAATGC
Suggested primer 2:GTACACACACACACACGCAC