Insertion junction: CLIP2.044722_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.044722
Chromosome:chromosome 14
Location:2476598
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g624000 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGATGTGACTGTTTCGGGATGGCCAGGGATGGCTTTGGAATGCCCTGA
Internal bar code:TCACTTCTCATCGTTCGGCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:307
LEAP-Seq percent confirming:35.7143
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACGCACACAAACCATG
Suggested primer 2:CAAACAGTGCGGAACCAGTG