Insertion junction: CLIP2.044722_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044722
Chromosome:chromosome 14
Location:2476610
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g624000 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCACATCCAACCCAGCACGGACCCCGGCCGGCGGACTCACCGAGCGCT
Internal bar code:TCACTTCTCATCGTTCGGCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2015
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACAGTGCGGAACCAGTG
Suggested primer 2:ACACACGCACACAAACCATG