Insertion junction: CLIP2.044736_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.044736
Chromosome:chromosome 2
Location:1136521
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g080850 CYN47,CYN11 Cyclophilin 47; (1 of 1) IPR003582//IPR029000 - ShKT domain // Cyclophilin-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCACCCCAACACGCCTGCCCCGCCTCCTGCCGCGTGGCACTGGAGTCT
Internal bar code:TCGGCAAAGCCGCGCGAGTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:952
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GAAACGTGCGTGTTGCTTCT
Suggested primer 2:AACTGTGGACGGCTGCATTA