Insertion junction: CLIP2.044744_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044744
Chromosome:chromosome 14
Location:3496313
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g630700 (1 of 2) IPR006212//IPR009030//IPR011641 - Furin-like repeat // Insulin-like growth factor binding protein, N-terminal // Tyrosine-protein kinase ephrin type A/B receptor-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGTGTCTCCCCCCACACACACACAGGCCCGAGTACCTCCAATGCAC
Internal bar code:CCTATTCGCACTTTATGGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1905
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTGAGCAACTTGCCGAGC
Suggested primer 2:CGACTACGGCAAATGCTTCG