Insertion junction: CLIP2.044751_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.044751
Chromosome:chromosome 11
Location:3275589
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g476376 FAP221,Pcdp1,RPC82 Flagellar Associated Protein 221; (1 of 1) PTHR23053//PTHR23053:SF21 - DLEC1 DELETED IN LUNG AND ESOPHAGEAL CANCER 1 // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCCCAACAACCCAGCAACCCATGTACTCTTTCAACTTCCACCCCTGC
Internal bar code:CCGGATTATCTGTTTTTAAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:144
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACACACACACTCGT
Suggested primer 2:TTTGGTGGCTATGAGCTGGG