Insertion junction: CLIP2.044789_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.044789
Chromosome:chromosome 16
Location:6195429
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676800 (1 of 1) PTHR11017//PTHR11017:SF145//PTHR11017:SF158//PTHR12203//PTHR12203:SF13 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED // KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED // F10K1.7 PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGTTCGGCAAGGTGGTGCCGCCCGGCGTGGGCCCCGACACCACCATCC
Internal bar code:CGGCACATGGCAGAAACCGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3531
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGATGGTGGGTGATGCTT
Suggested primer 2:CATCTATGAGAGCGGCCTGG