Insertion junction: CLIP2.044797_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.044797
Chromosome:chromosome 16
Location:2623481
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661300 THB10 (1 of 6) PTHR10681//PTHR10681:SF118 - THIOREDOXIN PEROXIDASE // SUBFAMILY NOT NAMED; Truncated hemoglobin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCATGAAACTAATCCCCTCGGAATACTGGGCGCACATACATATCCACAG
Internal bar code:GGTTGTCAGTGAGCTGGACCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:772
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTGAAGGCTTCCTACA
Suggested primer 2:GTCAATCCCGCCCTGGTAAA