Insertion junction: CLIP2.044827_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044827
Chromosome:chromosome 2
Location:6921958
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388949 (1 of 1) PTHR10237 - DEFORMED EPIDERMAL AUTOREGULATORY FACTOR 1 HOMOLOG SUPPRESSIN CDS
Cre09.g388986 (1 of 1) PTHR23329//PTHR23329:SF9 - TUFTELIN-INTERACTING PROTEIN 11-RELATED // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCAGCGCAGGAGCTTGCCCGGAGCGACGTTGCTACAGGTCGCGCACGC
Internal bar code:ACCGTCTGTAAATGAAAGTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3471
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GACGCTGAGAAGAGCCAGTT
Suggested primer 2:TAGACAGGGACAGGGACAGG