Insertion junction: CLIP2.044829_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.044829
Chromosome:chromosome 1
Location:3435711
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g022200 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCATGCTAATAGTCAACGCGGTGCTGTTGGGCATGAGCTACGCGGAGA
Internal bar code:ATGTGTGAAAGAGCCTTTATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:543
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TGATCCGGAACACCAGGTTG
Suggested primer 2:CACTCCCTCCTCCTTAGCCT