Insertion junction: CLIP2.044831_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.044831
Chromosome:chromosome 6
Location:2780814
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g271450 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCACGGCTTGCCGTATTCTGTTTCAGGCAGCATTGCTCGCCTTCCGCCC
Internal bar code:AATAGTGCGTTTTCAAGTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:561
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAGGTTGAGGCTGGTGAG
Suggested primer 2:GGCTTCACCTCGGCAGTAAT