Insertion junction: CLIP2.044834_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044834
Chromosome:chromosome 16
Location:2212465
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g658200 (1 of 2) IPR003594//IPR024975 - Histidine kinase-like ATPase, C-terminal domain // Domain of unknown function DUF3883 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCAAGCAACCGAGGATGATACAGCACTGCCCCTTGCCTGCTGCTGTC
Internal bar code:ATAAGAAGTTTCCGTCAAAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:439
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGCTCCTTACTCCTCCT
Suggested primer 2:AGCAGCGCAAGTAAGTAGCA