Insertion junction: CLIP2.044836_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.044836
Chromosome:chromosome 13
Location:2792005
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g582650 MAPK1,LF4 (1 of 1) K08830 - renal tumor antigen [EC:2.7.11.22] (RAGE, MOK); Mitogen-activated protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTCACGTCCCCCAAGGAGCATCCTAACATCCTACCCTGCCTTATCTT
Internal bar code:GGTCCGTCTCATAAAGGGCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:207
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TACGTGGCCATCAAGTGCAT
Suggested primer 2:CACCTCCAGCAGCTTGATGA