Insertion junction: CLIP2.044841_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.044841
Chromosome:chromosome 16
Location:249488
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694450 DNJ36,CGL57 (1 of 1) PTHR24078//PTHR24078:SF250 - DNAJ HOMOLOG SUBFAMILY C MEMBER // CHAPERONE DNAJ-DOMAIN CONTAINING PROTEIN-RELATED; DnaJ-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCAGACGACGTGCTGCTGCTGGTGTCCGTTCGGGCATGCGTGGGTAGT
Internal bar code:ATGAGCGCTCCAGGTCATTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1188
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACTTCATGCAATGGCGC
Suggested primer 2:ATTTTCCGCCGTGTTTTGGG