Insertion junction: CLIP2.044842_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.044842
Chromosome:chromosome 12
Location:7498841
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g556750 TIC32,TIC32-1,SDR22 Short-chain dehydrogenase/reductase; (1 of 2) 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTAGAAGTGGGCGACGTGGTTGACGCCCGTCTGCAACTCCAAGCCGTCC
Internal bar code:CAGCAACGAAGAGAGCCGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1369
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTGGTGTTAGACCTGT
Suggested primer 2:TCAGATCGTCCATCGGCATG