Insertion junction: CLIP2.044847_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044847
Chromosome:chromosome 5
Location:1333839
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241655 (1 of 24) IPR001478 - PDZ domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGACGTGGTCATCTTGGCGGGGGCTTGATTCCTACATATGCCGGAGGG
Internal bar code:ATGTGATTTAACCAGTGATAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1371
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GACGTGTTTGTGTTGGGTCG
Suggested primer 2:CATTGAGCTTCGCATGTCGG