Insertion junction: CLIP2.044849_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.044849
Chromosome:chromosome 12
Location:9110264
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544050 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTGCCAACGTGGTGACATCGTCCTACCCAATGCCTAGGACAGCTTGA
Internal bar code:ATTATCAAATTTTTTGGAAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1141
LEAP-Seq percent confirming:41.6667
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCACGGTACCTAACACG
Suggested primer 2:CGCTCGCAGTGTTACGATTG