Insertion junction: CLIP2.044858_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.044858
Chromosome:chromosome 10
Location:4059309
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g447800 (1 of 3) K11089 - 60 kDa SS-A/Ro ribonucleoprotein (TROVE2, SSA2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCTTGGCAACGCGAAAGCTACTTATATGCTAACTCCTAAGCGATGCT
Internal bar code:TGGACCTGCCTAATGTGTAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:56
LEAP-Seq percent confirming:5.88235
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGACGAGAGGGTGCAAACTC
Suggested primer 2:AACGTCAAACCAATGCAGCC